Direct Generation of Conditional Alleles Using CRISPR/Cas9 in Mouse Zygotes

Methods Mol Biol. 2017:1642:21-35. doi: 10.1007/978-1-4939-7169-5_2.

Abstract

Conditional alleles in genetically modified mice allow for the deletion of a gene of interest in a target tissue when combined with a tissue-specific Cre recombinase. A conditional allele is achieved by introducing LoxP sites around a critical exon, a gene, or a cluster of genes. Previously, conditional alleles were introduced in the mouse germline by classic gene targeting in embryonic stem cells, a challenging and time-consuming procedure. Now, conditional alleles can be generated directly in fertilized mouse eggs (zygotes) using the CRISPR/Cas9 technology. This one-step generation of mice is easier in design and faster. Here, we describe our achieved success rate, the considerations in design of a conditional allele, a detailed protocol to prepare the zygote injection mix, and the screening procedure to identify the new conditional knockout mouse strain.

Keywords: CRISPR/Cas9; Conditional allele; Cre recombinase; Germline; In vitro transcription; LoxP; Transgenesis; Zygote.

MeSH terms

  • Alleles*
  • Animals
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • CRISPR-Associated Protein 9
  • CRISPR-Cas Systems
  • Clustered Regularly Interspaced Short Palindromic Repeats
  • Endonucleases / genetics
  • Endonucleases / metabolism
  • Founder Effect*
  • Gene Editing / methods*
  • Gene Targeting / methods*
  • Genome*
  • Germ-Line Mutation
  • Integrases / genetics
  • Integrases / metabolism
  • Mice
  • Mice, Transgenic*
  • Microinjections
  • Mouse Embryonic Stem Cells / cytology
  • Mouse Embryonic Stem Cells / metabolism
  • RNA, Guide, CRISPR-Cas Systems / genetics
  • RNA, Guide, CRISPR-Cas Systems / metabolism
  • Zygote / growth & development
  • Zygote / metabolism*

Substances

  • Bacterial Proteins
  • RNA, Guide, CRISPR-Cas Systems
  • Cre recombinase
  • Integrases
  • CRISPR-Associated Protein 9
  • Cas9 protein, Francisella novicida
  • Endonucleases