Characterization of multi-drug resistant Mycobacterium tuberculosis from immigrants residing in the USA using Ion Torrent full-gene sequencing

Epidemiol Infect. 2014 Jun;142(6):1328-33. doi: 10.1017/S0950268813002409. Epub 2013 Sep 27.

Abstract

Drug-resistant Mycobacterium tuberculosis bacterium (MTB) is spreading worldwide. Three drug-resistant isolates were detected in Burmese, Hmong, and Indian immigrants currently residing in Milwaukee, Wisconsin, USA. Ion Torrent full-gene sequencing and complete genetic analysis was performed within 5 days and compared to results from traditional drug sensitivity testing (DST). Genetic characterization of seven, full-length resistance-associated genes revealed two MDR and one highly resistant strain with important drug-resistant mutations that were confirmed by traditional DST. The rapid turnaround from sample-to-sequence underscores the public health value of Ion Torrent full-gene sequencing of MDR/XDR genes from epidemiologically significant clinical isolates.

MeSH terms

  • Antitubercular Agents
  • Bacterial Proteins / genetics
  • Bacteriological Techniques / methods*
  • China / epidemiology
  • Drug Resistance, Multiple, Bacterial
  • Emigrants and Immigrants
  • Genome, Bacterial
  • High-Throughput Nucleotide Sequencing / methods*
  • Humans
  • India / epidemiology
  • Molecular Sequence Data
  • Myanmar / epidemiology
  • Mycobacterium tuberculosis / drug effects*
  • Tuberculosis, Multidrug-Resistant / epidemiology
  • Tuberculosis, Multidrug-Resistant / microbiology*
  • Wisconsin / epidemiology

Substances

  • Antitubercular Agents
  • Bacterial Proteins