Template-constrained macrocyclic peptides prepared from native, unprotected precursors

Proc Natl Acad Sci U S A. 2013 Oct 1;110(40):E3753-60. doi: 10.1073/pnas.1311706110. Epub 2013 Sep 16.

Abstract

Peptide-protein interactions are important mediators of cellular-signaling events. Consensus binding motifs (also known as short linear motifs) within these contacts underpin molecular recognition, yet have poor pharmacological properties as discrete species. Here, we present methods to transform intact peptides into stable, templated macrocycles. Two simple steps install the template. The key reaction is a palladium-catalyzed macrocyclization. The catalysis has broad scope and efficiently forms large rings by engaging native peptide functionality including phenols, imidazoles, amines, and carboxylic acids without the necessity of protecting groups. The tunable reactivity of the template gives the process special utility. Defined changes in reaction conditions markedly alter chemoselectivity. In all cases examined, cyclization occurs rapidly and in high yield at room temperature, regardless of peptide composition or chain length. We show that conformational restraints imparted by the template stabilize secondary structure and enhance proteolytic stability in vitro. Palladium-catalyzed internal cinnamylation is a strong complement to existing methods for peptide modification.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Catalysis
  • Chromatography, High Pressure Liquid
  • Macrocyclic Compounds / chemical synthesis*
  • Macrocyclic Compounds / chemistry*
  • Magnetic Resonance Spectroscopy
  • Molecular Structure
  • Palladium / chemistry
  • Peptides, Cyclic / chemistry*
  • Protein Conformation

Substances

  • Macrocyclic Compounds
  • Peptides, Cyclic
  • Palladium