A role for the Perlman syndrome exonuclease Dis3l2 in the Lin28-let-7 pathway

Nature. 2013 May 9;497(7448):244-8. doi: 10.1038/nature12119. Epub 2013 Apr 17.

Abstract

The pluripotency factor Lin28 blocks the expression of let-7 microRNAs in undifferentiated cells during development, and functions as an oncogene in a subset of cancers. Lin28 binds to let-7 precursor (pre-let-7) RNAs and recruits 3' terminal uridylyl transferases to selectively inhibit let-7 biogenesis. Uridylated pre-let-7 is refractory to processing by Dicer, and is rapidly degraded by an unknown RNase. Here we identify Dis3l2 as the 3'-5' exonuclease responsible for the decay of uridylated pre-let-7 in mouse embryonic stem cells. Biochemical reconstitution assays show that 3' oligouridylation stimulates Dis3l2 activity in vitro, and knockdown of Dis3l2 in mouse embryonic stem cells leads to the stabilization of pre-let-7. Our study establishes 3' oligouridylation as an RNA decay signal for Dis3l2, and identifies the first physiological RNA substrate of this new exonuclease, which is mutated in the Perlman syndrome of fetal overgrowth and causes a predisposition to Wilms' tumour development.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Cells, Cultured
  • Embryonic Stem Cells / metabolism
  • Exonucleases / metabolism*
  • Exoribonucleases / metabolism*
  • Fetal Macrosomia / enzymology*
  • Fetal Macrosomia / genetics*
  • Fetal Macrosomia / metabolism
  • HEK293 Cells
  • Humans
  • Mice
  • MicroRNAs / genetics
  • MicroRNAs / metabolism*
  • RNA Precursors / genetics
  • RNA Precursors / metabolism
  • RNA Processing, Post-Transcriptional
  • RNA Stability*
  • RNA-Binding Proteins / metabolism*
  • Ribonucleases / metabolism*
  • Substrate Specificity
  • Uridine Monophosphate / analogs & derivatives
  • Uridine Monophosphate / metabolism
  • Wilms Tumor / enzymology*
  • Wilms Tumor / etiology
  • Wilms Tumor / genetics*
  • Wilms Tumor / metabolism

Substances

  • Lin-28 protein, mouse
  • MicroRNAs
  • RNA Precursors
  • RNA-Binding Proteins
  • mirnlet7 microRNA, mouse
  • 3'-uridylic acid
  • Uridine Monophosphate
  • Dis3l2 protein, mouse
  • Exonucleases
  • Exoribonucleases
  • Ribonucleases

Supplementary concepts

  • Nephroblastomatosis, fetal ascites, macrosomia and Wilms tumor