The role of miRNAs in regulating gene expression networks

J Mol Biol. 2013 Oct 9;425(19):3582-600. doi: 10.1016/j.jmb.2013.03.007. Epub 2013 Mar 13.

Abstract

MicroRNAs (miRNAs) are key regulators of gene expression. They are conserved across species, expressed across cell types, and active against a large proportion of the transcriptome. The sequence-complementary mechanism of miRNA activity exploits combinatorial diversity, a property conducive to network-wide regulation of gene expression, and functional evidence supporting this hypothesized systems-level role has steadily begun to accumulate. The emerging models are exciting and will yield deep insight into the regulatory architecture of biology. However, because of the technical challenges facing the network-based study of miRNAs, many gaps remain. Here, we review mammalian miRNAs by describing recent advances in understanding their molecular activity and network-wide function.

Keywords: Ago2; Argonaute 2; Dicer; Drosha; EMT; ESC; KO; RISC; RNA-induced silencing complex; TGFβ; UTR; embryonic stem cell; epithelial-to-mesenchymal transition; knockout; let-7; miRNA; microRNA; network; pre-miRNA; precursor miRNA; transforming growth factor beta; untranslated region.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.
  • Review

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Argonaute Proteins / chemistry
  • Argonaute Proteins / genetics
  • Gene Expression*
  • Gene Regulatory Networks*
  • Humans
  • MicroRNAs / genetics*
  • MicroRNAs / metabolism
  • Molecular Sequence Data
  • Phenotype
  • Protein Conformation
  • RNA-Induced Silencing Complex / genetics
  • RNA-Induced Silencing Complex / metabolism
  • Transcription Factors / genetics
  • Transcription Factors / metabolism
  • Transcriptome

Substances

  • Argonaute Proteins
  • MicroRNAs
  • RNA-Induced Silencing Complex
  • Transcription Factors