An alternative high output tissue microarray technique

Diagn Pathol. 2013 Jan 21:8:9. doi: 10.1186/1746-1596-8-9.

Abstract

Background: Tissue microarray (TMA) is a high throughput research tool, which has greatly facilitated and accelerated in situ tissue analyses. However, its productivity has been restricted due to the confined thickness of traditional donor block. Here, we introduce an improved high output TMA method that is applicable to a broader range of tissue samples.

Methods: In this method, a 3.6 cm long and 2.7 cm wide recipient block with 88 square lattices (3 mm in width) was first prepared using several commercial instruments. A 2 mm wide and 6 mm long tissue rod was then prepared using a self-made blade-shaped knife from each paraffin embedded donor block of gastrointestinal stromal tumors. These rods were manually arrayed one by one into the corresponding lattices of the 60°C pre-softened recipient block with the guide of holes drilled with a steel needle. A 70-rod TMA was made to testify this method.

Results: The prepared TMA had well defined array configurations, good tissue morphology and fully preserved proteins and DNA. A total of 500-1000 TMA sections could be easily obtained from a TMA block.

Conclusion: This low-cost and time-saving method provides an alternative sampling tool for high output TMA.

Virtual slides: The virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/1979605867857990.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Mutational Analysis
  • Equipment Design
  • Feasibility Studies
  • Gastrointestinal Stromal Tumors* / chemistry
  • Gastrointestinal Stromal Tumors* / genetics
  • Gastrointestinal Stromal Tumors* / pathology
  • High-Throughput Screening Assays / instrumentation
  • High-Throughput Screening Assays / methods*
  • Humans
  • Immunohistochemistry
  • Microtomy
  • Mutation
  • Paraffin Embedding
  • Proto-Oncogene Proteins c-kit / analysis
  • Proto-Oncogene Proteins c-kit / genetics
  • Receptor, Platelet-Derived Growth Factor alpha / genetics
  • Reproducibility of Results
  • Retrospective Studies
  • Specimen Handling
  • Time Factors
  • Tissue Array Analysis / instrumentation
  • Tissue Array Analysis / methods*

Substances

  • Proto-Oncogene Proteins c-kit
  • Receptor, Platelet-Derived Growth Factor alpha