Detection of truncated dystrophin lacking the C-terminal domain in a Chinese pedigree by next-generation sequencing

Gene. 2012 May 10;499(1):139-42. doi: 10.1016/j.gene.2012.03.029. Epub 2012 Mar 9.

Abstract

Dystrophin (DMD) gene is the largest gene containing 79 exons involving various mutation types and regions, and targeted next-generation sequencing (NGS) was employed in detecting DMD gene mutation in the present study. A literature-annotated disease nonsense mutation (c.10141C>T, NM_004006.1) in exon 70 that has been reported as Duchenne Muscular Dystrophy (DMD)-causing mutation was found in our two patients, the proband and his cousin. In the present study two main methods were used, the next-generation sequencing and the classic Sanger sequencing. The exon capture followed by HiSeq2000 sequencing was specifically used in this study. Combined applications of the next-generation sequencing platform and bioinformatics are proved to be effective methods for DMD diagnosis.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Asian People / genetics
  • Child
  • Codon, Nonsense / genetics
  • Codon, Nonsense / physiology*
  • DNA Mutational Analysis / methods
  • Dystrophin / analysis
  • Dystrophin / chemistry
  • Dystrophin / genetics*
  • Family
  • Female
  • High-Throughput Nucleotide Sequencing*
  • Humans
  • Male
  • Muscular Dystrophy, Duchenne / diagnosis
  • Muscular Dystrophy, Duchenne / genetics
  • Pedigree
  • Protein Isoforms / chemistry
  • Protein Isoforms / genetics
  • Protein Structure, Tertiary / genetics
  • Review Literature as Topic

Substances

  • Codon, Nonsense
  • DMD protein, human
  • Dystrophin
  • Protein Isoforms