MIPSPlantsDB--plant database resource for integrative and comparative plant genome research

Nucleic Acids Res. 2007 Jan;35(Database issue):D834-40. doi: 10.1093/nar/gkl945.

Abstract

Genome-oriented plant research delivers rapidly increasing amount of plant genome data. Comprehensive and structured information resources are required to structure and communicate genome and associated analytical data for model organisms as well as for crops. The increase in available plant genomic data enables powerful comparative analysis and integrative approaches. PlantsDB aims to provide data and information resources for individual plant species and in addition to build a platform for integrative and comparative plant genome research. PlantsDB is constituted from genome databases for Arabidopsis, Medicago, Lotus, rice, maize and tomato. Complementary data resources for cis elements, repetive elements and extensive cross-species comparisons are implemented. The PlantsDB portal can be reached at http://mips.gsf.de/projects/plants.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / genetics
  • Base Sequence
  • Conserved Sequence
  • DNA, Plant / chemistry
  • Databases, Nucleic Acid*
  • Fabaceae / genetics
  • Genome, Plant*
  • Genomics
  • Internet
  • Plant Proteins / chemistry
  • Poaceae / genetics
  • Promoter Regions, Genetic
  • Repetitive Sequences, Nucleic Acid
  • Sequence Homology, Amino Acid
  • Software
  • Solanum lycopersicum / genetics
  • Systems Integration
  • User-Computer Interface

Substances

  • DNA, Plant
  • Plant Proteins