A uniform genomic minor histocompatibility antigen typing methodology and database designed to facilitate clinical applications

PLoS One. 2006 Dec 20;1(1):e42. doi: 10.1371/journal.pone.0000042.

Abstract

Background: Minor Histocompatibility (H) antigen mismatches significantly influence the outcome of HLA-matched allogeneic stem cell transplantation. The molecular identification of human H antigens is increasing rapidly. In parallel, clinical application of minor H antigen typing has gained interest. So far, relevant and simple tools to analyze the minor H antigens in a quick and reliable way are lacking.

Methodology and findings: We developed a uniform PCR with sequence-specific primers (PCR-SSP) for 10 different autosomal minor H antigens and H-Y. This genomic minor H antigen typing methodology allows easy incorporation in the routine HLA typing procedures. DNA from previously typed EBV-LCL was used to validate the methodology. To facilitate easy interpretation for clinical purposes, a minor H database named dbMinor (http://www.lumc.nl/dbminor) was developed. Input of the minor H antigen typing results subsequently provides all relevant information for a given patient/donor pair and additional information on the putative graft-versus-host, graft-versus-tumor and host-versus-graft reactivities.

Significance: A simple, uniform and rapid methodology was developed enabling determination of minor H antigen genotypes of all currently identified minor H antigens. A dbMinor database was developed to interpret the genomic typing for its potential clinical relevance. The combination of the minor H antigen genomic typing methodology with the online dbMinor database and applications facilitates the clinical application of minor H antigens anti-tumor targets after stem cell transplantation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Base Sequence
  • DNA Primers / genetics
  • Databases, Genetic
  • H-Y Antigen / genetics
  • HLA Antigens / genetics
  • Histocompatibility Testing / methods*
  • Humans
  • Minor Histocompatibility Antigens / genetics*
  • Minor Histocompatibility Loci*
  • Polymerase Chain Reaction / methods
  • Stem Cell Transplantation

Substances

  • DNA Primers
  • H-Y Antigen
  • HLA Antigens
  • Minor Histocompatibility Antigens