5-hydroxyuracil can form stable base pairs with all four bases in a DNA duplex

Chem Commun (Camb). 2005 Jan 21:(3):400-2. doi: 10.1039/b414474k. Epub 2004 Nov 30.

Abstract

NMR studies, UV-monitored melting experiments, and ab initio calculations show that 5-hydroxyuracil, produced by the oxidative de-amination of cytosines by reactive oxygen species, can form stable base-pairs with dA, dG, dC and dT residues in a DNA duplex, providing a basis for the in-vivo incorporation of 5-hydroxyuracil during DNA replication.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Pairing*
  • DNA / chemistry*
  • Magnetic Resonance Spectroscopy
  • Nucleic Acid Conformation
  • Nucleosides / chemistry*
  • Oxidation-Reduction
  • Uracil / analogs & derivatives*
  • Uracil / chemistry

Substances

  • Nucleosides
  • 5-hydroxyuracil
  • Uracil
  • DNA