Development of a tightly regulated U6 promoter for shRNA expression

FEBS Lett. 2004 Nov 19;577(3):376-80. doi: 10.1016/j.febslet.2004.10.033.

Abstract

Short hairpin RNAs (shRNAs) have been used to achieve stable target knockdown in a variety of biological systems. Here, we report the development of a tightly regulated tetracycline-responsive human U6 promoter for shRNA expression. By engineering two copies of the tet operators flanking the TATA box of the human U6 promoter, we created a U6 promoter derivative (2O2) that exhibited much lower basal transcriptional activity compared with recently reported inducible pol III dependent promoters. As a consequence of its tighter regulation, the 2O2 system greatly improved the success rate in making inducible knockdown cell lines.

Publication types

  • Comparative Study

MeSH terms

  • Blotting, Western
  • Cell Line, Tumor
  • Cloning, Molecular
  • Gene Expression Regulation / drug effects
  • Genes, Reporter
  • Genetic Variation
  • HeLa Cells
  • Humans
  • Luciferases / metabolism
  • Molecular Sequence Data
  • Promoter Regions, Genetic*
  • RNA, Small Interfering / chemistry
  • RNA, Small Interfering / genetics*
  • RNA, Small Interfering / metabolism*
  • Sequence Homology, Nucleic Acid
  • TATA Box
  • Tetracycline / pharmacology
  • Transcription, Genetic

Substances

  • RNA, Small Interfering
  • Luciferases
  • Tetracycline