The strains of influenza A -A(H1N1), A(H3N2) and B viruses were shown in the paper to have been circulating in Russia in 1999-2002. A co-circulation of viruses of 2 to 3 types was detected in all epidemic seasons. A majority of strains was isolated on the culture of cells MDCK. A study of epidemic strains revealed the predominance of viruses A(H3N2) in 1999-2000, the predominance of viruses A(h1N1) in 2000-2001, and the predominance of influenza B viruses in 2001-2002. According to the conducted antigenic analysis, all A(H1N1) isolates were similar to the etalon A/New Caledonia/20/99. The antigenic drift of hemagglutinin of A(H3N2) epidemic strains was oriented towards the etalons of A/Sydney/5/97--A/Moscow/10/99; while in influenza B viruses it was oriented towards the etalons B/Beejing/184/93--B/Yamanashi/166/98--B/Sichuan/379/99. Sequencing of hemagglutinin gene HA1 showed certain difference in the gene structure of epidemic strains A(H1N1) and A(H3N2) versus the etalon ones, which were registered, including at antigen sites. An analysis of paired sera obtained from patients confirmed the virologic findings, i.e. it detected a growth of antibodies to viruses that circulated during an actual season.