Overexpression, purification, crystallization and preliminary structural study of dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD), the fourth enzyme of the dTDP-L-rhamnose synthesis pathway, from Salmonella enterica serovar Typhimurium

Acta Crystallogr D Biol Crystallogr. 1999 Dec;55(Pt 12):2043-6. doi: 10.1107/s0907444999012251.

Abstract

L-Rhamnose is an essential component of the cell wall of many pathogenic bacteria. Its precursor, dTDP-L-rhamnose, is synthesized from alpha-D-glucose-1-phosphate and dTTP via a pathway requiring four distinct enzymes: RmlA, RmlB, RmlC and RmlD. RmlD catalyses the terminal step of this pathway by converting dTDP-6-deoxy-L-lyxo-4-hexulose to dTDP-L-rhamnose. RmlD from -Salmonella enterica serovar Typhimurium has been overexpressed in Escherichia coli. The recombinant protein was purified by a two--step protocol involving anion-exchange and hydrophobic chromatography. Dynamic light-scattering experiments indicated that the recombinant protein is monodisperse. Crystals of native and selenomethionine-enriched RmlD have been obtained using the sitting-drop vapour-diffusion method with polyethylene glycol as precipitant. Diffraction data have been collected from orthorhombic crystals of both native and selenomethionyl-derivatized protein, allowing tracing of the protein structure.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carbohydrate Dehydrogenases / chemistry*
  • Carbohydrate Dehydrogenases / genetics
  • Carbohydrate Dehydrogenases / isolation & purification*
  • Crystallization
  • Crystallography, X-Ray
  • Escherichia coli / genetics
  • Gene Expression
  • Genes, Bacterial
  • Nucleoside Diphosphate Sugars / biosynthesis
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Salmonella typhimurium / enzymology*
  • Salmonella typhimurium / genetics
  • Thymine Nucleotides / biosynthesis

Substances

  • Nucleoside Diphosphate Sugars
  • Recombinant Proteins
  • Thymine Nucleotides
  • thymidine diphosphate rhamnose
  • Carbohydrate Dehydrogenases
  • dTDP-4-dehydrorhamnose reductase